Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 MIR4277-201ENST00000578298 84 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 AC015813.4-201ENST00000610469 179 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 MIR7151-201ENST00000617477 60 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTDNEP1O95476 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 MFSD8-242ENST00000641690 4199 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 BTBD10P1-201ENST00000549824 1352 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 RHOT1P2-201ENST00000366423 333 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 RPS4XP9-201ENST00000405151 780 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC011933.1-201ENST00000413334 321 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 OR2X1P-201ENST00000421144 687 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 SETP10-201ENST00000424368 814 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 VDAC1P6-201ENST00000430062 855 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC009963.2-201ENST00000453431 138 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 RAD23BP3-201ENST00000454157 1152 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC116533.1-201ENST00000459748 321 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 RN7SL303P-201ENST00000469773 251 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC091167.1-201ENST00000492017 396 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 OR51K1P-201ENST00000510214 950 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 KCTD9P2-201ENST00000512203 1013 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC099522.1-202ENST00000514718 367 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 OR5M7P-201ENST00000526140 972 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC105233.3-201ENST00000531125 744 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC022655.2-201ENST00000577280 318 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 MIR3138-201ENST00000585238 82 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 RPL26P30-202ENST00000602923 645 ntBASIC4.84□□□□□ -1.63
CTDNEP1O95476 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CTDNEP1O95476 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDNEP1O95476 MARK2P15-201ENST00000432204 2186 ntBASIC4.84□□□□□ -1.64
CTDNEP1O95476 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTDNEP1O95476 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 AL133243.3-201ENST00000617415 3004 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 OR4K17-201ENST00000315543 1032 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTDNEP1O95476 AL050305.1-201ENST00000399993 1230 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 GAPDHP49-201ENST00000421421 961 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 BTF3P10-201ENST00000433415 495 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 AC006011.1-201ENST00000442758 349 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 PTMAP3-201ENST00000447474 330 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 RNA5SP246-201ENST00000458909 119 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 AC017037.1-201ENST00000508460 471 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTDNEP1O95476 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 AL390334.1-201ENST00000556395 450 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 AC114878.2-201ENST00000604863 1251 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 AC015922.4-201ENST00000612568 690 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 AC074140.1-201ENST00000621617 208 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTDNEP1O95476 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTDNEP1O95476 ERCC6-202ENST00000374127 1782 ntBASIC4.83□□□□□ -1.64
CTDNEP1O95476 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTDNEP1O95476 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTDNEP1O95476 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC053481.2-202ENST00000582394 1500 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
CTDNEP1O95476 AC021242.1-201ENST00000507315 2035 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 MAPK10-320ENST00000641462 6696 ntBASIC4.82□□□□□ -1.64
CTDNEP1O95476 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTDNEP1O95476 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms