Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 KARSP2-201ENST00000415696 1639 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 NACAP2-201ENST00000318548 624 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 Y_RNA.138-201ENST00000363462 102 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 SNORA30B-201ENST00000365319 129 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 SNORD15A-201ENST00000384214 148 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 RPL7P60-201ENST00000397636 735 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AL353151.1-201ENST00000402406 604 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 KRT18P52-201ENST00000404956 846 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 RPS21P8-201ENST00000413365 247 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC006548.1-201ENST00000427470 102 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 CYP2C56P-201ENST00000440076 291 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC104651.2-201ENST00000447549 528 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 WBP1LP1-201ENST00000460451 896 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC073594.1-201ENST00000462065 364 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC099340.1-201ENST00000475247 599 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC026826.1-201ENST00000493002 361 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 RPS10P20-201ENST00000494130 463 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC093664.1-201ENST00000511779 289 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC107953.1-201ENST00000522216 297 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 NXPE2P1-201ENST00000543705 726 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 MIR3671-201ENST00000580455 88 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 KC877982.1-201ENST00000602313 470 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 Z84480.1-201ENST00000605131 311 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AL355472.4-201ENST00000610233 626 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AL354950.2-201ENST00000617939 290 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 CR381572.1-201ENST00000625098 102 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 AL592429.1-201ENST00000403909 1473 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 MTND5P33-201ENST00000571250 1450 ntBASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
DEPDC4Q8N2C3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 OR4G1P-203ENST00000641984 1631 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 RNU6-28P-201ENST00000362378 107 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 Y_RNA.384-201ENST00000383909 102 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AL356421.1-201ENST00000403255 413 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 VDAC2P3-201ENST00000430995 828 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AL161722.1-201ENST00000446972 1032 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 VN1R38P-201ENST00000450265 887 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AC022431.1-201ENST00000450941 438 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 CACYBPP2-201ENST00000453625 678 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AC019080.2-201ENST00000453859 394 ntBASIC6.69□□□□□ -1.34
DEPDC4Q8N2C3 AC022730.2-201ENST00000465359 452 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms