Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC010486.2-201ENST00000505572 483 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE4Q8N205 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 SNORA70.11-201ENST00000515987 138 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 SNORA70.13-201ENST00000516116 138 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 NDUFB4P11-201ENST00000560510 395 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC073091.2-201ENST00000603205 907 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC124016.2-201ENST00000610058 665 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 AC008759.3-201ENST00000613300 508 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.11□□□□□ -1.43
SYNE4Q8N205 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE4Q8N205 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE4Q8N205 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SYNE4Q8N205 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SYNE4Q8N205 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 OR10AB1P-202ENST00000641219 1686 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 IQCB2P-201ENST00000401788 1633 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC063976.2-201ENST00000425667 3556 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 RNA5SP388-201ENST00000362584 119 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 MTATP6P20-201ENST00000414147 562 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 ARL2BPP3-201ENST00000421226 480 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC010099.3-201ENST00000423896 409 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC234779.1-201ENST00000425910 285 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 RPL23AP1-201ENST00000428990 471 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 MRPS21P3-201ENST00000436696 262 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 MTCO1P53-201ENST00000441633 699 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 CDC27P1-201ENST00000445384 715 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 NUTF2P7-201ENST00000453086 375 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC121161.1-201ENST00000510606 652 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 NPM1P5-201ENST00000557228 838 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 MTCYBP13-201ENST00000578634 1093 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC022726.1-201ENST00000587475 207 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC119751.7-201ENST00000600494 245 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC087752.4-201ENST00000605911 462 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC010424.2-201ENST00000607594 443 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 FAM27B-201ENST00000610601 213 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AC013562.2-201ENST00000611632 603 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 MLECP1-201ENST00000615893 709 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL161637.1-201ENST00000622380 412 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 BX649567.1-201ENST00000642071 1134 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 SNX18P3-202ENST00000565670 1750 ntBASIC6.1□□□□□ -1.43
SYNE4Q8N205 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE4Q8N205 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE4Q8N205 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE4Q8N205 OR5H2-201ENST00000355273 945 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE4Q8N205 SNORA70F-201ENST00000384142 135 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 RNU6-906P-201ENST00000384700 70 ntBASIC6.09□□□□□ -1.43
SYNE4Q8N205 MIR23B-201ENST00000384832 97 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms