Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC006363.1-201ENST00000603806 463 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 OR2BH1P-201ENST00000608850 864 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL445423.1-201ENST00000609941 536 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC006338.2-201ENST00000616864 791 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC073569.3-201ENST00000619055 682 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC068831.8-201ENST00000620171 435 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL669942.2-201ENST00000620352 697 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL359757.1-201ENST00000623176 255 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC126544.2-201ENST00000625174 749 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 RNU6-207P-201ENST00000384137 107 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 RPL22P22-201ENST00000395439 379 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 RPL23AP59-201ENST00000399415 461 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AL049693.1-201ENST00000402760 611 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC233289.1-201ENST00000403700 508 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 HMGB3P31-201ENST00000413333 595 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC124944.2-201ENST00000429866 1242 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 FABP5P3-201ENST00000437960 408 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 FHP1-201ENST00000442741 703 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 CASP3P1-201ENST00000446037 609 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 IGHV5-78-201ENST00000450948 295 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 RN7SL189P-201ENST00000468631 289 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 RPS27AP18-201ENST00000515536 459 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 snoU109.6-201ENST00000516831 118 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 CYB5AP5-201ENST00000549779 389 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AP000919.1-202ENST00000581139 1264 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 MIR4660-201ENST00000583549 74 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AL020997.2-201ENST00000602607 184 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC020910.2-201ENST00000603635 610 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AP005432.2-201ENST00000608162 586 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC016597.2-201ENST00000613256 341 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 AC099654.2-201ENST00000433031 1980 ntBASIC5.47□□□□□ -1.53
HERC6Q8IVU3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HERC6Q8IVU3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HERC6Q8IVU3 SEC63P2-201ENST00000503863 1939 ntBASIC5.46□□□□□ -1.53
HERC6Q8IVU3 AC027228.2-201ENST00000567141 2154 ntBASIC5.46□□□□□ -1.53
HERC6Q8IVU3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
HERC6Q8IVU3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 HSPD1P14-201ENST00000432666 1618 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 RN7SKP153-201ENST00000365026 316 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC013404.1-201ENST00000413068 249 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 HYALP1-201ENST00000417674 1279 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC004690.1-201ENST00000418216 328 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 RPS27AP7-201ENST00000422792 455 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 MTCO3P21-201ENST00000430791 643 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 RPS24P8-201ENST00000431490 402 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC093414.1-201ENST00000434712 514 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AL354710.1-201ENST00000453641 246 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 MTATP6P14-201ENST00000455189 673 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 RPL23AP12-201ENST00000467573 473 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC007537.2-201ENST00000472093 511 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 RPS24P16-201ENST00000497294 392 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AK3P4-201ENST00000504283 583 ntBASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.46□□□□□ -1.54
HERC6Q8IVU3 HMGN1P9-201ENST00000515212 298 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms