Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA13P31271 AC010266.2-201ENST00000564741 3255 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 AL672167.1-205ENST00000641112 3080 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA13P31271 TCP1P3-201ENST00000414406 1498 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA13P31271 AL391684.1-202ENST00000641293 1636 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 SPATA2P1-201ENST00000431223 2055 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HOXA13P31271 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA13P31271 TAF9BP2-201ENST00000400856 499 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 Z98745.1-201ENST00000402553 494 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AL080315.1-201ENST00000406055 466 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC002524.1-201ENST00000411687 547 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA13P31271 OR6K4P-201ENST00000423179 955 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 RPS6P14-201ENST00000425165 719 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA13P31271 MORF4L1P7-201ENST00000426038 703 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AL732292.1-201ENST00000426692 226 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC092905.1-201ENST00000467527 949 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC098799.3-201ENST00000506095 438 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC034205.1-201ENST00000520621 638 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA13P31271 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA13P31271 AC092451.2-201ENST00000538746 658 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA13P31271 CR383656.14-201ENST00000551951 406 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA13P31271 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXA13P31271 A2MP1-204ENST00000566278 4130 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA13P31271 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXA13P31271 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HOXA13P31271 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA13P31271 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXA13P31271 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXA13P31271 SUMO2P14-201ENST00000604488 293 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC034236.3-201ENST00000605999 461 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AL121873.1-201ENST00000616013 524 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC145207.9-201ENST00000623802 325 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC097372.4-201ENST00000625025 466 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 AC120338.1-201ENST00000625074 1541 ntBASIC5.27□□□□□ -1.57
HOXA13P31271 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HOXA13P31271 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA13P31271 RAD17P1-201ENST00000418130 2042 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA13P31271 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA13P31271 AC135352.1-201ENST00000506173 1418 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
HOXA13P31271 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA13P31271 AL672167.1-204ENST00000641875 3017 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA13P31271 RNA5SP447-201ENST00000363749 119 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA13P31271 PEX12P1-201ENST00000400284 1048 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 TATDN1P1-201ENST00000414123 891 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 RPL7AP25-201ENST00000423357 805 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 RPL18P10-201ENST00000425606 538 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 UBE2V1P6-201ENST00000430840 422 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 RPL23AP93-201ENST00000440847 484 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA13P31271 NDUFA5P9-201ENST00000472609 340 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 AC112206.4-201ENST00000515142 405 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 HAUS1P3-201ENST00000523909 662 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AP000859.1-201ENST00000525536 307 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HOXA13P31271 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA13P31271 AC006518.1-201ENST00000541449 943 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA13P31271 AC068831.4-201ENST00000556118 109 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 MIR4277-201ENST00000578298 84 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 CBX3P2-202ENST00000583365 535 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 AC008782.1-201ENST00000603386 430 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AC026790.2-201ENST00000606282 430 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA13P31271 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA13P31271 MIR6798-201ENST00000612887 67 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AL133243.1-201ENST00000614487 366 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AC006249.1-201ENST00000621223 471 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AL391262.2-201ENST00000622466 494 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AC006840.1-201ENST00000623069 542 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AL359757.1-201ENST00000623176 255 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 AL138960.2-201ENST00000625145 535 ntBASIC5.26□□□□□ -1.57
HOXA13P31271 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA13P31271 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms