Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX4O60224 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX4O60224 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX4O60224 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX4O60224 AC009313.2-201ENST00000417893 1941 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC092079.1-201ENST00000558620 1985 ntBASIC4.6□□□□□ -1.67
SSX4O60224 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SSX4O60224 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
SSX4O60224 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 CASC19-204ENST00000641001 2055 ntBASIC4.6□□□□□ -1.67
SSX4O60224 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSX4O60224 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 RPL23AP59-201ENST00000399415 461 ntBASIC4.6□□□□□ -1.67
SSX4O60224 DUTP5-201ENST00000406790 469 ntBASIC4.6□□□□□ -1.67
SSX4O60224 RN7SKP199-201ENST00000410325 305 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC096533.1-201ENST00000411645 353 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AL139128.1-201ENST00000413921 941 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX4O60224 AC093162.1-201ENST00000419682 124 ntBASIC4.6□□□□□ -1.67
SSX4O60224 SRSF1P1-201ENST00000424058 520 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC115285.1-201ENST00000424879 736 ntBASIC4.6□□□□□ -1.67
SSX4O60224 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX4O60224 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX4O60224 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX4O60224 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 AL031584.1-201ENST00000447169 754 ntBASIC4.6□□□□□ -1.67
SSX4O60224 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX4O60224 AC112206.1-201ENST00000468416 477 ntBASIC4.6□□□□□ -1.67
SSX4O60224 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX4O60224 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 AC109462.1-201ENST00000491087 368 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC005912.1-201ENST00000495392 255 ntBASIC4.6□□□□□ -1.67
SSX4O60224 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 ARL4AP1-201ENST00000503220 705 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC010627.1-201ENST00000503819 1294 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX4O60224 NDUFB5P1-201ENST00000508134 564 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX4O60224 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 MTND1P6-201ENST00000523621 946 ntBASIC4.6□□□□□ -1.67
SSX4O60224 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 CYB5AP5-201ENST00000549779 389 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AL121594.4-201ENST00000556211 1196 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.6□□□□□ -1.67
SSX4O60224 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 AC069307.1-201ENST00000602820 447 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC099785.1-201ENST00000605697 437 ntBASIC4.6□□□□□ -1.67
SSX4O60224 OR7A19P-201ENST00000608051 733 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC109583.2-201ENST00000617367 129 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC138907.10-201ENST00000623708 983 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AC010608.3-201ENST00000625048 527 ntBASIC4.6□□□□□ -1.67
SSX4O60224 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX4O60224 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 ZNF849P-201ENST00000594711 1566 ntBASIC4.6□□□□□ -1.67
SSX4O60224 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSX4O60224 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.6□□□□□ -1.67
SSX4O60224 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.6□□□□□ -1.67
SSX4O60224 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SSX4O60224 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX4O60224 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 AC103591.2-201ENST00000265259 766 ntBASIC4.59□□□□□ -1.67
SSX4O60224 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX4O60224 U3.2-201ENST00000362981 210 ntBASIC4.59□□□□□ -1.67
SSX4O60224 RN7SKP224-201ENST00000364140 325 ntBASIC4.59□□□□□ -1.67
SSX4O60224 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSX4O60224 RNU6-317P-201ENST00000384031 107 ntBASIC4.59□□□□□ -1.67
SSX4O60224 RNU1-106P-201ENST00000384382 164 ntBASIC4.59□□□□□ -1.67
SSX4O60224 U3.32-201ENST00000408116 212 ntBASIC4.59□□□□□ -1.67
SSX4O60224 RPL37P18-201ENST00000411602 243 ntBASIC4.59□□□□□ -1.67
SSX4O60224 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX4O60224 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX4O60224 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX4O60224 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 AC124944.2-201ENST00000429866 1242 ntBASIC4.59□□□□□ -1.67
SSX4O60224 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 AC000041.1-201ENST00000439655 175 ntBASIC4.59□□□□□ -1.67
SSX4O60224 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX4O60224 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 HSFY3P-201ENST00000444242 1191 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 RPL7L1P1-201ENST00000448259 785 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC073850.1-201ENST00000449243 255 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX4O60224 RPL10P17-201ENST00000453852 316 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AL389915.2-201ENST00000454576 441 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AC091685.2-201ENST00000454924 864 ntBASIC4.59□□□□□ -1.67
SSX4O60224 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX4O60224 AC008280.2-201ENST00000455473 307 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms