Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC074029.4-201ENST00000624796 1859 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 GTF3AP1-201ENST00000416942 1004 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 MTND4LP13-201ENST00000425022 298 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 NPM1P26-201ENST00000426339 738 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 FHP1-201ENST00000442741 703 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 ABCF2P2-201ENST00000450549 296 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC105918.1-201ENST00000474399 838 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 IGLV2-34-201ENST00000490007 283 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 RNA5SP497-201ENST00000516081 97 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 PHBP17-201ENST00000528576 541 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 EDDM3DP-201ENST00000554692 434 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC016180.1-201ENST00000567945 403 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AL512624.1-201ENST00000613638 469 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AL356317.1-201ENST00000396110 1436 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 AC132825.1-201ENST00000463573 2247 ntBASIC4.18□□□□□ -1.74
VAPAQ9P0L0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VAPAQ9P0L0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 MIR513A2-201ENST00000385249 127 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 RPL23AP48-201ENST00000406913 488 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 RNU4-34P-201ENST00000410431 124 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 RPS20P14-201ENST00000412545 360 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 RPS23P10-201ENST00000416185 486 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 PA2G4P6-201ENST00000438325 1197 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 RPS27AP17-201ENST00000463344 455 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC083829.1-201ENST00000503756 657 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC020634.1-201ENST00000608701 549 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC015922.4-201ENST00000612568 690 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC015722.2-201ENST00000622210 551 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC019278.1-201ENST00000623516 479 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 LINC01808-202ENST00000641680 1116 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 ASNSP1-201ENST00000518311 1939 ntBASIC4.17□□□□□ -1.74
VAPAQ9P0L0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VAPAQ9P0L0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 SNORA51.1-201ENST00000363243 140 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 RNU4-7P-201ENST00000364758 141 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 MIR93-201ENST00000385024 80 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC093719.1-202ENST00000392735 373 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AL109941.1-201ENST00000401925 229 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 RNU2-50P-201ENST00000410494 143 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 RPL31P44-201ENST00000447680 377 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 OR6C72P-201ENST00000451403 892 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms