Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 AP001002.2-201ENST00000625137 386 ntBASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 AP000473.2-201ENST00000602659 1537 ntBASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK3Q9BYB0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 DDX18P6-201ENST00000450119 1997 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AL356968.2-201ENST00000412769 1257 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AL450992.3-201ENST00000413192 568 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 MTND6P5-201ENST00000448266 512 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 RPL6P9-201ENST00000466502 859 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AC092162.3-201ENST00000624511 1624 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 AC020656.2-201ENST00000613291 5309 ntBASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.55□□□□□ -1.52
SHANK3Q9BYB0 MIR921-201ENST00000401133 56 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AL080315.1-201ENST00000406055 466 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 PLGLA-201ENST00000465668 449 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC069304.1-201ENST00000491593 704 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 ATP1B1P1-201ENST00000509767 915 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 NPM1P5-201ENST00000557228 838 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 TVP23BP1-201ENST00000557500 617 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 MIR4513-201ENST00000581077 86 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC010487.1-201ENST00000594408 1172 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 MIMT1-201ENST00000597105 1050 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC005000.2-201ENST00000605468 310 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 MIR6500-201ENST00000622700 86 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AL672167.1-204ENST00000641875 3017 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC116667.1-201ENST00000604855 2072 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AL035425.3-201ENST00000564206 4996 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 U8.11-201ENST00000384699 133 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 U8.12-201ENST00000384701 133 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 U8.18-201ENST00000459285 133 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 SETP6-201ENST00000479329 568 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 DUX4L52-201ENST00000549363 777 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC096553.1-201ENST00000605169 829 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 AC234782.5-201ENST00000617723 324 ntBASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SHANK3Q9BYB0 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 RNU1-20P-201ENST00000363314 162 ntBASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 AC009506.2-201ENST00000420635 840 ntBASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 RPS26P4-201ENST00000431743 355 ntBASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 PARP4P3-201ENST00000510265 317 ntBASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK3Q9BYB0 AL391261.4-201ENST00000616012 481 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms