Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC011979.2-201ENST00000527568 352 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC068993.1-201ENST00000546724 589 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC090607.2-201ENST00000560331 695 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 NDUFA3P1-201ENST00000588007 252 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL512782.1-201ENST00000603093 364 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL008729.2-201ENST00000606393 473 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL159972.1-201ENST00000625150 448 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL732372.2-225ENST00000642124 456 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC083806.2-201ENST00000617795 2685 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 AL080317.3-201ENST00000607434 4315 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 OR9M1P-202ENST00000641564 3163 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC036108.4-201ENST00000611654 2516 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 AC244517.1-201ENST00000606030 2086 ntBASIC6.94□□□□□ -1.3
USB1Q9BQ65 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.94□□□□□ -1.3
USB1Q9BQ65 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
USB1Q9BQ65 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 MARK2P10-201ENST00000454959 1437 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 DHX40P1-201ENST00000588725 1412 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 THAP12P1-201ENST00000398672 2203 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 MAPK10-323ENST00000641493 3207 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 RNU6-874P-201ENST00000362390 105 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 Y_RNA.396-201ENST00000383949 103 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 SNORA51.6-201ENST00000384151 125 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC009965.2-201ENST00000425328 970 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL161722.2-201ENST00000434731 981 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL137074.1-201ENST00000442640 465 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 MTCO3P45-201ENST00000443036 613 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RPSAP49-201ENST00000445182 886 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RPL7L1P11-201ENST00000446092 721 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 CDC42P2-201ENST00000448566 569 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RPS29P5-201ENST00000452777 171 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL451074.1-202ENST00000453762 989 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AP000893.1-201ENST00000474462 794 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RPL12P20-201ENST00000475538 479 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 HMGB3P17-201ENST00000504195 649 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RNU6-408P-201ENST00000515910 100 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 MIR4262-201ENST00000578394 54 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC006120.1-201ENST00000579375 546 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RN7SL311P-201ENST00000579858 306 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC011477.5-201ENST00000586571 259 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC005262.1-201ENST00000588562 362 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 VN1R84P-201ENST00000593697 235 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL021918.1-201ENST00000603933 236 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL354984.3-201ENST00000604803 325 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 RNU6-84P-201ENST00000607737 102 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 PISRT1.1-201ENST00000616930 107 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL442639.1-201ENST00000625030 1899 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
USB1Q9BQ65 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms