Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL365203.2-201ENST00000423444 196 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC113412.1-201ENST00000425840 504 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 NPM1P22-201ENST00000427761 952 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 MTND5P2-201ENST00000442927 1142 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 RPL36AP39-201ENST00000445859 318 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 OR52E3P-201ENST00000452083 936 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 ANKRD26P4-201ENST00000455755 950 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC021660.1-201ENST00000465006 554 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 RN7SL188P-201ENST00000469842 285 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC091959.2-201ENST00000477363 321 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC104687.1-201ENST00000485829 412 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC084024.2-201ENST00000503480 791 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC111000.2-201ENST00000507775 550 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 OR5H4P-201ENST00000510851 923 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC098976.1-201ENST00000513014 541 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC112191.2-201ENST00000522428 333 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 MTCO1P49-201ENST00000523429 802 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AP003033.1-201ENST00000527244 415 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 PMS2P3-207ENST00000529061 717 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC122688.1-201ENST00000541494 223 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AADACP1-206ENST00000561502 1193 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 MIR4311-201ENST00000580794 100 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 OR2AS2P-201ENST00000606902 342 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 AC026585.1-201ENST00000619582 524 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 U6.107-201ENST00000637108 79 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 MTCO1P11-201ENST00000429111 1528 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 SMG1P4-204ENST00000523028 4131 ntBASIC5.07□□□□□ -1.6
SNX18Q96RF0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SNX18Q96RF0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX18Q96RF0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 RBPJP2-201ENST00000618187 1444 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX18Q96RF0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX18Q96RF0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX18Q96RF0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX18Q96RF0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX18Q96RF0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX18Q96RF0 RNU1-150P-201ENST00000362491 162 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX18Q96RF0 MIR320B1-201ENST00000390209 79 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 AL136131.1-201ENST00000406079 803 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 MIR1203-201ENST00000408812 85 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 AC245060.4-201ENST00000413293 1121 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 MRPL53P1-201ENST00000414323 319 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 AL035660.1-201ENST00000422041 222 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 TNPO1P1-201ENST00000423641 1138 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 CHEK2P5-201ENST00000423877 246 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 AC234781.2-201ENST00000426370 994 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 BX323845.3-201ENST00000428215 527 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX18Q96RF0 RPL7P29-201ENST00000437151 728 ntBASIC5.06□□□□□ -1.6
SNX18Q96RF0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms