Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MIR3936-201ENST00000584304 110 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 MIR3138-201ENST00000585238 82 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AL590392.1-201ENST00000604960 446 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 AL159169.2-201ENST00000610061 1269 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TNFSF9P41273 uc_338.13-201ENST00000618243 179 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TNFSF9P41273 AC007546.2-201ENST00000623996 360 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 OR52H1-202ENST00000641796 1061 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.76□□□□□ -1.65
TNFSF9P41273 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.76□□□□□ -1.65
TNFSF9P41273 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFSF9P41273 EIF2AP4-201ENST00000424793 1781 ntBASIC4.76□□□□□ -1.65
TNFSF9P41273 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.76□□□□□ -1.65
TNFSF9P41273 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.75□□□□□ -1.65
TNFSF9P41273 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFSF9P41273 CUL4AP1-201ENST00000514750 1863 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFSF9P41273 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 OR4K17-201ENST00000315543 1032 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 RNA5SP307-201ENST00000362863 116 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AL359643.1-201ENST00000404109 423 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 RSL24D1P6-201ENST00000426934 401 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFSF9P41273 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFSF9P41273 RPL7P32-201ENST00000457119 744 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AC090013.1-201ENST00000485147 480 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TNFSF9P41273 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.75□□□□□ -1.65
TNFSF9P41273 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFSF9P41273 TOMM20P2-201ENST00000540082 421 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFSF9P41273 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFSF9P41273 AC021483.2-201ENST00000567415 758 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AC136624.4-201ENST00000573044 370 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFSF9P41273 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFSF9P41273 RPL7P50-201ENST00000600588 727 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AC097505.1-201ENST00000610199 565 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AC005962.2-201ENST00000611427 652 ntBASIC4.75□□□□□ -1.65
TNFSF9P41273 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFSF9P41273 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFSF9P41273 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
TNFSF9P41273 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFSF9P41273 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TNFSF9P41273 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF9P41273 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF9P41273 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF9P41273 AC133552.1-201ENST00000569988 4007 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 RNU1-132P-201ENST00000364300 164 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 MIR137-201ENST00000385223 102 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 SNORA11F-201ENST00000408237 128 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 SNORA74C-2-201ENST00000411179 201 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF9P41273 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF9P41273 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF9P41273 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF9P41273 RNA5SP103-201ENST00000459503 118 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 STRADBP1-201ENST00000478954 1281 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF9P41273 AC041039.1-201ENST00000485656 536 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF9P41273 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF9P41273 RN7SKP122-201ENST00000515923 296 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 AL358913.1-201ENST00000554342 121 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 AC090515.3-201ENST00000560431 315 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 AC093591.2-201ENST00000565254 3843 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF9P41273 AC023575.1-201ENST00000580510 358 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 AC007546.1-201ENST00000619452 559 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF9P41273 FP325313.1-201ENST00000638228 703 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 AL158163.1-201ENST00000603915 1649 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF9P41273 EOGT-210ENST00000615922 1931 ntBASIC4.74□□□□□ -1.65
TNFSF9P41273 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF9P41273 MAPK10-303ENST00000641324 3959 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.73□□□□□ -1.65
TNFSF9P41273 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFSF9P41273 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF9P41273 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF9P41273 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms