Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 snoZ40.1-201ENST00000364540 72 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU6-146P-201ENST00000384602 108 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 PAICSP7-201ENST00000419829 962 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 RPL7P56-201ENST00000429441 717 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 GTF2IP7-202ENST00000436677 309 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 IGBP1P3-201ENST00000447449 1000 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC096992.1-201ENST00000459808 709 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL51P-201ENST00000468230 285 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL583P-201ENST00000475692 287 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC011037.1-201ENST00000483964 558 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC090638.1-201ENST00000498296 909 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU6-941P-201ENST00000516346 108 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SKP96-201ENST00000516948 297 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AF279873.1-201ENST00000523393 313 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC023050.2-201ENST00000544968 387 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AP001269.3-201ENST00000588718 329 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 SUGT1P3-202ENST00000604259 383 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AP000255.1-201ENST00000610276 676 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC009464.1-201ENST00000615731 469 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 MIR6133-201ENST00000617057 108 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AP003072.4-201ENST00000624580 310 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007938.2-201ENST00000604666 2634 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 DBF4P1-201ENST00000412976 1892 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC092681.1-201ENST00000297369 291 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SKP6-201ENST00000364795 319 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AL450992.3-201ENST00000413192 568 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 PCNPP4-201ENST00000414817 517 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 Z93019.1-201ENST00000416450 973 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 BX510359.3-201ENST00000422168 306 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 CFL1P1-202ENST00000432948 411 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 MTND2P40-201ENST00000436718 841 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC104306.1-201ENST00000449702 371 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AZGP1P2-201ENST00000454506 345 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 OR52A4P-201ENST00000472867 958 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL629P-201ENST00000489622 285 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 DYNLL1P6-201ENST00000503440 264 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC048346.1-201ENST00000510247 144 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC097486.1-201ENST00000515331 210 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 OR4A2P-201ENST00000527276 913 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC004217.3-201ENST00000551552 878 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AL390816.3-201ENST00000604527 1066 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AP003973.1-201ENST00000604639 691 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC069545.1-201ENST00000605671 358 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC105227.2-201ENST00000615075 605 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007786.3-201ENST00000615154 596 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC009159.2-201ENST00000617603 606 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 AC124312.6-202ENST00000623624 418 ntBASIC6.15□□□□□ -1.42
COL4A3BPQ9Y5P4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 AP005901.5-201ENST00000545779 1796 ntBASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.15□□□□□ -1.43
COL4A3BPQ9Y5P4 AC018809.2-201ENST00000602436 3823 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms