Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC093719.1-202ENST00000392735 373 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 RN7SKP267-201ENST00000410381 285 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC099336.2-201ENST00000422457 254 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 IPMKP1-201ENST00000425988 855 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC097523.2-201ENST00000435551 652 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 CNOT7P2-201ENST00000441051 832 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC092647.3-201ENST00000443044 633 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 GEMIN8P3-201ENST00000445417 720 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC099560.2-201ENST00000457554 255 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC092905.1-201ENST00000467527 949 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 COPS8P2-201ENST00000473228 627 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 NPM1P45-201ENST00000583151 559 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 BNIP3P32-201ENST00000600015 554 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC010201.1-201ENST00000605051 540 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC022467.1-201ENST00000614738 749 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC015722.2-201ENST00000622210 551 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AC004808.2-201ENST00000627965 773 ntBASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.5□□□□□ -1.69
NUDCD3Q8IVD9 AL592182.3-201ENST00000642132 3304 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 RNA5SP105-201ENST00000391123 113 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC092642.1-201ENST00000392417 425 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AL121834.1-202ENST00000404494 277 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 RPS26P47-201ENST00000427219 348 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 CDY14P-201ENST00000431260 1014 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 CDY12P-201ENST00000440679 1015 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 RPL7P33-201ENST00000444159 742 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 CDY13P-201ENST00000445813 1015 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 CASP3P1-201ENST00000446037 609 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC108463.1-201ENST00000450258 347 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 CDY23P-201ENST00000451661 1014 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 C1DP3-201ENST00000455013 423 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 APOOP2-201ENST00000461561 539 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC006967.1-201ENST00000467608 589 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC125612.1-201ENST00000547580 377 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 MIR4489-201ENST00000578869 62 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC090181.2-201ENST00000602975 672 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC009163.6-201ENST00000612367 342 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AL356274.1-201ENST00000617064 410 ntBASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.49□□□□□ -1.69
NUDCD3Q8IVD9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 MAPK10-304ENST00000641341 3984 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 MIR448-201ENST00000362131 111 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 SNORA51.1-201ENST00000363243 140 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AL136131.1-201ENST00000406079 803 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AL160275.2-201ENST00000412010 394 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AC022022.1-201ENST00000430304 178 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 MTND2P2-201ENST00000434633 945 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 RPL31P53-201ENST00000457065 348 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 CCDC75P1-201ENST00000469247 791 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 SCARNA22-201ENST00000503991 125 ntBASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.48□□□□□ -1.69
NUDCD3Q8IVD9 AC013701.1-201ENST00000522657 465 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms