Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC4P09017 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 AC015912.2-201ENST00000571053 181 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXC4P09017 AC130352.1-201ENST00000602979 661 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 BPIFA4P-203ENST00000603168 689 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AC090948.1-201ENST00000607464 549 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC4P09017 LINC01808-202ENST00000641680 1116 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXC4P09017 AP000756.2-201ENST00000624168 2567 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 AL355852.1-201ENST00000454081 1771 ntBASIC4.48□□□□□ -1.69
HOXC4P09017 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC4P09017 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HOXC4P09017 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC4P09017 AC097461.1-201ENST00000568928 2821 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 AP000542.2-201ENST00000623199 6179 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC4P09017 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC4P09017 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HOXC4P09017 RNU1-83P-201ENST00000363426 164 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 RNU6-729P-201ENST00000384399 107 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 AL592291.1-201ENST00000403830 352 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 RN7SKP199-201ENST00000410325 305 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 COX6CP17-201ENST00000421389 185 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC4P09017 RPS26P2-201ENST00000440331 348 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 RPL23AP43-201ENST00000446445 471 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 TPT1P12-201ENST00000448968 492 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC4P09017 RPL5P16-201ENST00000471467 790 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 RN7SL810P-201ENST00000493031 276 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 AGGF1P3-201ENST00000493675 1213 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 AC113430.1-201ENST00000506872 718 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 RN7SKP34-201ENST00000516142 244 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 IGKV2D-10-201ENST00000520194 281 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC4P09017 ADAD1P2-201ENST00000588476 646 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC4P09017 AL354950.1-201ENST00000614150 568 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 AC107308.1-201ENST00000615897 301 ntBASIC4.47□□□□□ -1.69
HOXC4P09017 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HOXC4P09017 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC4P09017 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC4P09017 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC4P09017 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC4P09017 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC4P09017 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.46□□□□□ -1.69
HOXC4P09017 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC4P09017 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HOXC4P09017 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC4P09017 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC4P09017 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC4P09017 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC4P09017 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXC4P09017 MIR921-201ENST00000401133 56 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC4P09017 SEPT7P8-201ENST00000413308 775 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AC004690.1-201ENST00000418216 328 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC4P09017 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC4P09017 C4BPAP2-201ENST00000428434 478 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC4P09017 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC4P09017 RAB9AP5-201ENST00000437794 597 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AL138787.1-202ENST00000437804 898 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 RAB9AP2-201ENST00000443911 597 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC4P09017 RPL23AP24-201ENST00000458203 385 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 SEPT14P1-201ENST00000458703 648 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HOXC4P09017 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC4P09017 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXC4P09017 AC138938.1-201ENST00000515431 782 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC4P09017 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC4P09017 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXC4P09017 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC4P09017 AC011270.1-201ENST00000558606 583 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AC136624.4-201ENST00000573044 370 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC4P09017 AP001160.4-201ENST00000596971 382 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AC067838.1-201ENST00000606064 577 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC4P09017 MIR8069-1-201ENST00000616627 86 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AL158062.1-201ENST00000619632 745 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 MIR8069-2-201ENST00000621412 86 ntBASIC4.46□□□□□ -1.7
HOXC4P09017 AC006065.6-201ENST00000625201 545 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms