Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC234781.4-201ENST00000419384 244 ntBASIC5.04□□□□□ -1.6
VTNP04004 RPS12P10-201ENST00000427031 377 ntBASIC5.04□□□□□ -1.6
VTNP04004 MTCO3P43-201ENST00000440974 771 ntBASIC5.04□□□□□ -1.6
VTNP04004 FHP1-201ENST00000442741 703 ntBASIC5.04□□□□□ -1.6
VTNP04004 AC239798.3-201ENST00000454459 408 ntBASIC5.04□□□□□ -1.6
VTNP04004 NIP7P2-201ENST00000485801 544 ntBASIC5.04□□□□□ -1.6
VTNP04004 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.04□□□□□ -1.6
VTNP04004 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.04□□□□□ -1.6
VTNP04004 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.04□□□□□ -1.6
VTNP04004 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.04□□□□□ -1.6
VTNP04004 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.04□□□□□ -1.6
VTNP04004 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.04□□□□□ -1.6
VTNP04004 KPNA2P3-201ENST00000584190 848 ntBASIC5.04□□□□□ -1.6
VTNP04004 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.04□□□□□ -1.6
VTNP04004 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.04□□□□□ -1.6
VTNP04004 AL590392.1-201ENST00000604960 446 ntBASIC5.04□□□□□ -1.6
VTNP04004 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.04□□□□□ -1.6
VTNP04004 AL121890.3-201ENST00000618494 516 ntBASIC5.04□□□□□ -1.6
VTNP04004 AL109620.1-201ENST00000618738 1197 ntBASIC5.04□□□□□ -1.6
VTNP04004 AC009704.2-201ENST00000618739 483 ntBASIC5.04□□□□□ -1.6
VTNP04004 AL162233.1-201ENST00000620014 944 ntBASIC5.04□□□□□ -1.6
VTNP04004 AC011944.2-201ENST00000624440 683 ntBASIC5.04□□□□□ -1.6
VTNP04004 AP000720.1-201ENST00000625091 483 ntBASIC5.04□□□□□ -1.6
VTNP04004 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.04□□□□□ -1.6
VTNP04004 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTNP04004 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.04□□□□□ -1.6
VTNP04004 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTNP04004 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTNP04004 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
VTNP04004 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.04□□□□□ -1.6
VTNP04004 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.03□□□□□ -1.6
VTNP04004 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.03□□□□□ -1.6
VTNP04004 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.03□□□□□ -1.6
VTNP04004 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 RNA5SP509-201ENST00000364577 119 ntBASIC5.03□□□□□ -1.6
VTNP04004 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
VTNP04004 RNU6-152P-201ENST00000384037 107 ntBASIC5.03□□□□□ -1.6
VTNP04004 RNU6-883P-201ENST00000384597 107 ntBASIC5.03□□□□□ -1.6
VTNP04004 SNORA40.4-201ENST00000390971 128 ntBASIC5.03□□□□□ -1.6
VTNP04004 AL080315.1-201ENST00000406055 466 ntBASIC5.03□□□□□ -1.6
VTNP04004 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.03□□□□□ -1.6
VTNP04004 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.03□□□□□ -1.6
VTNP04004 SEPT7P8-201ENST00000413308 775 ntBASIC5.03□□□□□ -1.6
VTNP04004 RPL21P108-201ENST00000413857 481 ntBASIC5.03□□□□□ -1.6
VTNP04004 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.03□□□□□ -1.6
VTNP04004 AL356387.2-201ENST00000422272 243 ntBASIC5.03□□□□□ -1.6
VTNP04004 SETP10-201ENST00000424368 814 ntBASIC5.03□□□□□ -1.6
VTNP04004 AP001324.1-201ENST00000428553 399 ntBASIC5.03□□□□□ -1.6
VTNP04004 AC023141.6-201ENST00000429418 337 ntBASIC5.03□□□□□ -1.6
VTNP04004 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.03□□□□□ -1.6
VTNP04004 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.03□□□□□ -1.6
VTNP04004 AL606490.8-201ENST00000441624 319 ntBASIC5.03□□□□□ -1.6
VTNP04004 ISCUP1-201ENST00000454451 448 ntBASIC5.03□□□□□ -1.6
VTNP04004 RPL23AP24-201ENST00000458203 385 ntBASIC5.03□□□□□ -1.6
VTNP04004 AC098583.1-201ENST00000480875 255 ntBASIC5.03□□□□□ -1.6
VTNP04004 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.03□□□□□ -1.6
VTNP04004 PARP1P2-201ENST00000556806 195 ntBASIC5.03□□□□□ -1.6
VTNP04004 AC005962.2-201ENST00000611427 652 ntBASIC5.03□□□□□ -1.6
VTNP04004 AC006213.4-201ENST00000616184 634 ntBASIC5.03□□□□□ -1.6
VTNP04004 AC103798.2-201ENST00000624292 632 ntBASIC5.03□□□□□ -1.6
VTNP04004 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.03□□□□□ -1.6
VTNP04004 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTNP04004 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
VTNP04004 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VTNP04004 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.02□□□□□ -1.61
VTNP04004 AP001284.1-201ENST00000528393 2118 ntBASIC5.02□□□□□ -1.61
VTNP04004 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.02□□□□□ -1.61
VTNP04004 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VTNP04004 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VTNP04004 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
VTNP04004 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VTNP04004 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.02□□□□□ -1.61
VTNP04004 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VTNP04004 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.02□□□□□ -1.61
VTNP04004 TMSB10P2-201ENST00000416049 131 ntBASIC5.02□□□□□ -1.61
VTNP04004 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.02□□□□□ -1.61
VTNP04004 PTP4A1P1-201ENST00000420539 515 ntBASIC5.02□□□□□ -1.61
VTNP04004 GAPDHP49-201ENST00000421421 961 ntBASIC5.02□□□□□ -1.61
VTNP04004 CR848007.2-201ENST00000424918 787 ntBASIC5.02□□□□□ -1.61
VTNP04004 AC234779.1-201ENST00000425910 285 ntBASIC5.02□□□□□ -1.61
VTNP04004 RSL24D1P6-201ENST00000426934 401 ntBASIC5.02□□□□□ -1.61
VTNP04004 AL392003.1-201ENST00000434394 243 ntBASIC5.02□□□□□ -1.61
VTNP04004 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.02□□□□□ -1.61
VTNP04004 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.02□□□□□ -1.61
VTNP04004 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.02□□□□□ -1.61
VTNP04004 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.02□□□□□ -1.61
VTNP04004 AL935212.3-201ENST00000450729 284 ntBASIC5.02□□□□□ -1.61
VTNP04004 RPL10P17-201ENST00000453852 316 ntBASIC5.02□□□□□ -1.61
VTNP04004 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.02□□□□□ -1.61
VTNP04004 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.02□□□□□ -1.61
VTNP04004 AC091544.1-201ENST00000484702 348 ntBASIC5.02□□□□□ -1.61
VTNP04004 OR9N1P-201ENST00000491296 333 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms