Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR7E10P-201ENST00000526420 991 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MIR6500-201ENST00000622700 86 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AL450992.3-201ENST00000413192 568 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 RGS17P1-201ENST00000423358 553 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 NPM1P34-201ENST00000428821 893 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC104164.2-201ENST00000496953 495 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC027807.1-201ENST00000559921 996 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AGGF1P9-201ENST00000561884 913 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC068254.2-201ENST00000623938 3577 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 RPL21P67-201ENST00000402896 478 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 COX6CP13-201ENST00000428703 226 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC023632.4-201ENST00000517783 191 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC007179.3-201ENST00000604976 235 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AL391261.4-201ENST00000616012 481 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AL591135.1-201ENST00000401578 5914 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC006042.3-201ENST00000454684 1469 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 MAPK10-371ENST00000641952 5209 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 RN7SKP235-201ENST00000410662 305 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 NPM1P41-201ENST00000512920 831 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 LINC00622-201ENST00000562811 1570 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL356276.2-201ENST00000435919 558 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL162151.2-201ENST00000448875 158 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 OR5BC1P-201ENST00000529327 739 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 HSPE1P5-201ENST00000561489 272 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 HYDIN2-203ENST00000614586 13885 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms