Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 FKBP1AP1-201ENST00000594588 318 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 AC015849.6-201ENST00000605454 474 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 AC024940.4-201ENST00000605507 246 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.6□□□□□ -1.67
SHOX2O60902 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.6□□□□□ -1.67
SHOX2O60902 AC135352.1-201ENST00000506173 1418 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SHOX2O60902 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHOX2O60902 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHOX2O60902 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHOX2O60902 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHOX2O60902 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SHOX2O60902 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.59□□□□□ -1.67
SHOX2O60902 FCF1P5-201ENST00000406490 482 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 DUTP5-201ENST00000406790 469 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 RNU6-233P-201ENST00000410845 141 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.59□□□□□ -1.67
SHOX2O60902 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHOX2O60902 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHOX2O60902 AC234779.1-201ENST00000425910 285 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.59□□□□□ -1.67
SHOX2O60902 RPL23AP25-201ENST00000430973 463 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 RPL34P20-201ENST00000442771 351 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 OR9N1P-201ENST00000491296 333 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.59□□□□□ -1.67
SHOX2O60902 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.59□□□□□ -1.67
SHOX2O60902 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.59□□□□□ -1.67
SHOX2O60902 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHOX2O60902 MIR5699-201ENST00000578903 90 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 AP002884.5-201ENST00000595053 1132 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 AC025946.2-201ENST00000603398 234 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 AC103792.1-201ENST00000603591 919 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.59□□□□□ -1.67
SHOX2O60902 AL606537.1-201ENST00000607258 2011 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.59□□□□□ -1.67
SHOX2O60902 AL136164.3-201ENST00000624429 3978 ntBASIC4.59□□□□□ -1.67
SHOX2O60902 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.59□□□□□ -1.67
SHOX2O60902 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
SHOX2O60902 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHOX2O60902 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHOX2O60902 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHOX2O60902 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHOX2O60902 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.59□□□□□ -1.68
SHOX2O60902 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SHOX2O60902 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.58□□□□□ -1.68
SHOX2O60902 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHOX2O60902 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.58□□□□□ -1.68
SHOX2O60902 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHOX2O60902 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHOX2O60902 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHOX2O60902 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHOX2O60902 RNA5SP307-201ENST00000362863 116 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHOX2O60902 SNORA56-201ENST00000383966 129 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 GAPDHP15-201ENST00000398586 975 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AC233289.1-201ENST00000403700 508 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHOX2O60902 SNORA74C-2-201ENST00000411179 201 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AF186996.5-201ENST00000418098 904 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 DDX39BP1-205ENST00000422507 192 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.58□□□□□ -1.68
SHOX2O60902 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.58□□□□□ -1.68
SHOX2O60902 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.58□□□□□ -1.68
SHOX2O60902 AC092647.2-201ENST00000452998 253 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AC105918.1-201ENST00000474399 838 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.58□□□□□ -1.68
SHOX2O60902 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.58□□□□□ -1.68
SHOX2O60902 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.58□□□□□ -1.68
SHOX2O60902 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.58□□□□□ -1.68
SHOX2O60902 OR11J2P-201ENST00000555298 907 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.58□□□□□ -1.68
SHOX2O60902 AC020914.4-201ENST00000597690 277 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.58□□□□□ -1.68
SHOX2O60902 QTRT1P1-201ENST00000604344 1078 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AC078899.5-201ENST00000612475 178 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.58□□□□□ -1.68
SHOX2O60902 AC008785.1-201ENST00000624475 456 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.58□□□□□ -1.68
SHOX2O60902 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.58□□□□□ -1.68
SHOX2O60902 AC027228.2-201ENST00000567141 2154 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 ZNF962P-201ENST00000443465 3140 ntBASIC4.58□□□□□ -1.68
SHOX2O60902 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.57□□□□□ -1.68
SHOX2O60902 AC083899.2-201ENST00000423285 1376 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.57□□□□□ -1.68
SHOX2O60902 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHOX2O60902 RNA5SP322-201ENST00000363617 119 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.57□□□□□ -1.68
SHOX2O60902 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.57□□□□□ -1.68
SHOX2O60902 DPPA2P3-201ENST00000411853 655 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 GJA6P-201ENST00000415117 1042 ntBASIC4.57□□□□□ -1.68
SHOX2O60902 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.57□□□□□ -1.68
SHOX2O60902 AL772161.1-201ENST00000439130 476 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms