Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Speer3W4VSP1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Speer3W4VSP1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Speer3W4VSP1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.99■□□□□ 0.31
Speer3W4VSP1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.98■□□□□ 0.31
Speer3W4VSP1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.98■□□□□ 0.31
Speer3W4VSP1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.97■□□□□ 0.31
Speer3W4VSP1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.97■□□□□ 0.31
Speer3W4VSP1 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.97■□□□□ 0.31
Speer3W4VSP1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Speer3W4VSP1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.97■□□□□ 0.31
Speer3W4VSP1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.97■□□□□ 0.31
Speer3W4VSP1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Speer3W4VSP1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.96■□□□□ 0.31
Speer3W4VSP1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Speer3W4VSP1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Speer3W4VSP1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Speer3W4VSP1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Speer3W4VSP1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.95■□□□□ 0.3
Speer3W4VSP1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.95■□□□□ 0.3
Speer3W4VSP1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.95■□□□□ 0.3
Speer3W4VSP1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.95■□□□□ 0.3
Speer3W4VSP1 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.95■□□□□ 0.3
Speer3W4VSP1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Speer3W4VSP1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Speer3W4VSP1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms