Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp6v1c1Q9Z1G3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp6v1c1Q9Z1G3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Flg-201ENSMUST00000050758 1488 ntBASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp6v1c1Q9Z1G3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Mir8112-201ENSMUST00000184382 131 ntBASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp6v1c1Q9Z1G3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp6v1c1Q9Z1G3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.36■□□□□ 0.21
Atp6v1c1Q9Z1G3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp6v1c1Q9Z1G3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.35■□□□□ 0.21
Atp6v1c1Q9Z1G3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Atp6v1c1Q9Z1G3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms