Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nr1h3Q9Z0Y9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.07■□□□□ 0.48
Nr1h3Q9Z0Y9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm28659-201ENSMUST00000188013 759 ntBASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm34391-201ENSMUST00000203706 907 ntBASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm44771-201ENSMUST00000206975 626 ntBASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Mzt1-203ENSMUST00000227948 952 ntBASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Phf7-203ENSMUST00000226565 1971 ntBASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h3Q9Z0Y9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.04■□□□□ 0.48
Nr1h3Q9Z0Y9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms