Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh20Q9Z0M3 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Cdh20Q9Z0M3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Gm11539-201ENSMUST00000119837 557 ntBASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Gm13436-201ENSMUST00000120418 567 ntBASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh20Q9Z0M3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Gm7370-201ENSMUST00000219471 767 ntBASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh20Q9Z0M3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Cdh20Q9Z0M3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cdh20Q9Z0M3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Gm16061-201ENSMUST00000122167 857 ntBASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Gm13474-201ENSMUST00000122466 815 ntBASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh20Q9Z0M3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh20Q9Z0M3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh20Q9Z0M3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh20Q9Z0M3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms