Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.17■□□□□ 0.02
RlimQ9WTV7 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.17■□□□□ 0.02
RlimQ9WTV7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RlimQ9WTV7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Gm715-201ENSMUST00000117865 831 ntBASIC15.16■□□□□ 0.02
RlimQ9WTV7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Odf3b-204ENSMUST00000227834 930 ntBASIC15.16■□□□□ 0.02
RlimQ9WTV7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RlimQ9WTV7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RlimQ9WTV7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
RlimQ9WTV7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RlimQ9WTV7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms