Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atp6ap1Q9R1Q9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atp6ap1Q9R1Q9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Atp6ap1Q9R1Q9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atp6ap1Q9R1Q9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atp6ap1Q9R1Q9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp6ap1Q9R1Q9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.29■□□□□ 0.2
Atp6ap1Q9R1Q9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp6ap1Q9R1Q9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp6ap1Q9R1Q9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.28■□□□□ 0.2
Atp6ap1Q9R1Q9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp6ap1Q9R1Q9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms