Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.57□□□□□ -0.08
Nubp1Q9R060 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.57□□□□□ -0.08
Nubp1Q9R060 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nubp1Q9R060 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nubp1Q9R060 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Nubp1Q9R060 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.56□□□□□ -0.08
Nubp1Q9R060 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.56□□□□□ -0.08
Nubp1Q9R060 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nubp1Q9R060 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Gm23958-201ENSMUST00000157207 105 ntBASIC14.55□□□□□ -0.08
Nubp1Q9R060 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.55□□□□□ -0.08
Nubp1Q9R060 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nubp1Q9R060 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.54□□□□□ -0.08
Nubp1Q9R060 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.54□□□□□ -0.08
Nubp1Q9R060 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Gm18363-201ENSMUST00000221671 730 ntBASIC14.54□□□□□ -0.08
Nubp1Q9R060 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.54□□□□□ -0.08
Nubp1Q9R060 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nubp1Q9R060 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nubp1Q9R060 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nubp1Q9R060 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.53□□□□□ -0.08
Nubp1Q9R060 AC159246.1-201ENSMUST00000214478 249 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms