Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Gm44335-201ENSMUST00000196879 141 ntBASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Gm44297-201ENSMUST00000198304 141 ntBASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Gm44346-201ENSMUST00000198851 141 ntBASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a4Q9QZR9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Gm37153-201ENSMUST00000193637 231 ntBASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a4Q9QZR9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Gm20949-201ENSMUST00000206478 952 ntBASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Gm8825-201ENSMUST00000182565 998 ntBASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a4Q9QZR9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Mir1895-201ENSMUST00000122615 79 ntBASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Gm25948-201ENSMUST00000175334 112 ntBASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Gm44492-201ENSMUST00000197012 141 ntBASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.64■□□□□ 0.25
Col4a4Q9QZR9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a4Q9QZR9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms