Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Gm44450-201ENSMUST00000199528 114 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Gm7213-201ENSMUST00000215977 950 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Gm21559-201ENSMUST00000220638 855 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Gm7461-201ENSMUST00000058918 827 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Gm8587-201ENSMUST00000076538 843 ntBASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom3Q9QXN0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Gm11336-201ENSMUST00000118168 334 ntBASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Gm27389-201ENSMUST00000183622 195 ntBASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Shroom3Q9QXN0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Gm18115-201ENSMUST00000221209 621 ntBASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.67■□□□□ 0.26
Shroom3Q9QXN0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Haglr-201ENSMUST00000100000 2085 ntBASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Gm13186-201ENSMUST00000118031 316 ntBASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Gm18669-201ENSMUST00000216049 778 ntBASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shroom3Q9QXN0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shroom3Q9QXN0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms