Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trem1Q9JKE2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trem1Q9JKE2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trem1Q9JKE2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trem1Q9JKE2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Gm45760-201ENSMUST00000212190 1782 ntBASIC15□□□□□ -0.01
Trem1Q9JKE2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15□□□□□ -0.01
Trem1Q9JKE2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trem1Q9JKE2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trem1Q9JKE2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.98□□□□□ -0.01
Trem1Q9JKE2 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.98□□□□□ -0.01
Trem1Q9JKE2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trem1Q9JKE2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Asic1-205ENSMUST00000228185 1818 ntBASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trem1Q9JKE2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms