Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Gm7638-201ENSMUST00000121348 967 ntBASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Gm37025-201ENSMUST00000195159 829 ntBASIC17.76■□□□□ 0.43
Rtn3Q9ES97 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rtn3Q9ES97 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn3Q9ES97 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn3Q9ES97 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Gm45058-201ENSMUST00000205810 766 ntBASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn3Q9ES97 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Gm17661-201ENSMUST00000170317 270 ntBASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Gm9731-201ENSMUST00000209480 747 ntBASIC17.72■□□□□ 0.43
Rtn3Q9ES97 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms