Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tlr9Q9EQU3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr9Q9EQU3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr9Q9EQU3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tlr9Q9EQU3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Gm27741-201ENSMUST00000185060 237 ntBASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr9Q9EQU3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Tlr9Q9EQU3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr9Q9EQU3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms