Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upf1Q9EPU0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Gm27646-201ENSMUST00000183989 110 ntBASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Gm7653-201ENSMUST00000214567 508 ntBASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upf1Q9EPU0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Gm11745-201ENSMUST00000121669 448 ntBASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Gm2423-201ENSMUST00000074863 733 ntBASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upf1Q9EPU0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Gm15427-201ENSMUST00000117288 531 ntBASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.9■□□□□ 0.62
Upf1Q9EPU0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.89■□□□□ 0.62
Upf1Q9EPU0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.89■□□□□ 0.62
Upf1Q9EPU0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Upf1Q9EPU0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Upf1Q9EPU0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.89■□□□□ 0.62
Upf1Q9EPU0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Upf1Q9EPU0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.88■□□□□ 0.61
Upf1Q9EPU0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upf1Q9EPU0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms