Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
U2af1Q9D883 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.93■■□□□ 1.1
U2af1Q9D883 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
U2af1Q9D883 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
U2af1Q9D883 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
U2af1Q9D883 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.92■■□□□ 1.1
U2af1Q9D883 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
U2af1Q9D883 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.92■■□□□ 1.1
U2af1Q9D883 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
U2af1Q9D883 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1Q9D883 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
U2af1Q9D883 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.92■■□□□ 1.1
U2af1Q9D883 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1Q9D883 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
U2af1Q9D883 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.9■■□□□ 1.1
U2af1Q9D883 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.9■■□□□ 1.1
U2af1Q9D883 Gm45328-201ENSMUST00000210942 917 ntBASIC21.9■■□□□ 1.1
U2af1Q9D883 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.9■■□□□ 1.1
U2af1Q9D883 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
U2af1Q9D883 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
U2af1Q9D883 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.9■■□□□ 1.1
U2af1Q9D883 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1Q9D883 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
U2af1Q9D883 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.89■■□□□ 1.1
U2af1Q9D883 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1Q9D883 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.89■■□□□ 1.09
U2af1Q9D883 Ank2-226ENSMUST00000189368 339 ntBASIC21.89■■□□□ 1.09
U2af1Q9D883 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1Q9D883 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1Q9D883 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC21.89■■□□□ 1.09
U2af1Q9D883 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1Q9D883 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1Q9D883 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
U2af1Q9D883 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.88■■□□□ 1.09
U2af1Q9D883 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1Q9D883 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.87■■□□□ 1.09
U2af1Q9D883 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
U2af1Q9D883 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms