Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm37025-201ENSMUST00000195159 829 ntBASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Gm43183-201ENSMUST00000200632 547 ntBASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp5Q9D7S9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp5Q9D7S9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp5Q9D7S9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chmp5Q9D7S9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chmp5Q9D7S9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Gm18666-201ENSMUST00000190039 958 ntBASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Gm20049-201ENSMUST00000219950 730 ntBASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chmp5Q9D7S9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Gm27000-201ENSMUST00000182943 842 ntBASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp5Q9D7S9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp5Q9D7S9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms