Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Gm6433-201ENSMUST00000118634 875 ntBASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
5530400C23RikQ9D3I0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
5530400C23RikQ9D3I0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Gm45058-201ENSMUST00000205810 766 ntBASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Gm7213-201ENSMUST00000215977 950 ntBASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
5530400C23RikQ9D3I0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.34■□□□□ 0.21
5530400C23RikQ9D3I0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
5530400C23RikQ9D3I0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
5530400C23RikQ9D3I0 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.33■□□□□ 0.21
5530400C23RikQ9D3I0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
5530400C23RikQ9D3I0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
5530400C23RikQ9D3I0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.33■□□□□ 0.2
5530400C23RikQ9D3I0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
5530400C23RikQ9D3I0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
5530400C23RikQ9D3I0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms