Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Gm10033-202ENSMUST00000211874 928 ntBASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trim42Q9D2H5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Gm5874-201ENSMUST00000096101 508 ntBASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim42Q9D2H5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim42Q9D2H5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Gm6211-202ENSMUST00000167849 925 ntBASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Gm8495-201ENSMUST00000188740 694 ntBASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim42Q9D2H5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim42Q9D2H5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms