Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssr1Q9CY50 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssr1Q9CY50 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssr1Q9CY50 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ssr1Q9CY50 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssr1Q9CY50 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ssr1Q9CY50 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Gm5643-201ENSMUST00000117081 966 ntBASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Gm15378-201ENSMUST00000121894 207 ntBASIC18.08■□□□□ 0.48
Ssr1Q9CY50 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssr1Q9CY50 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Gm24841-201ENSMUST00000158676 357 ntBASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr1Q9CY50 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.06■□□□□ 0.48
Ssr1Q9CY50 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr1Q9CY50 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms