Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf135Q9CWS1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Gm27000-201ENSMUST00000182943 842 ntBASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Gm21814-202ENSMUST00000203277 873 ntBASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Gm9731-201ENSMUST00000209480 747 ntBASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf135Q9CWS1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf135Q9CWS1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Gm7638-201ENSMUST00000121348 967 ntBASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Rnf135Q9CWS1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Gm38027-201ENSMUST00000192315 235 ntBASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf135Q9CWS1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms