Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sft2d3Q9CSV6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sft2d3Q9CSV6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.21□□□□□ -0.14
Sft2d3Q9CSV6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sft2d3Q9CSV6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sft2d3Q9CSV6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sft2d3Q9CSV6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Gm13474-201ENSMUST00000122466 815 ntBASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Gm18101-201ENSMUST00000215769 548 ntBASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sft2d3Q9CSV6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Idnk-204ENSMUST00000226010 1898 ntBASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Gm18032-201ENSMUST00000222541 538 ntBASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Sft2d3Q9CSV6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sft2d3Q9CSV6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms