Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Gm7638-201ENSMUST00000121348 967 ntBASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc43Q9CR29 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Gm18958-201ENSMUST00000174258 762 ntBASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc43Q9CR29 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc43Q9CR29 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Odf3b-204ENSMUST00000227834 930 ntBASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc43Q9CR29 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Mir5122-201ENSMUST00000175004 89 ntBASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms