Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chchd1Q9CQA6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Gm29791-202ENSMUST00000207888 369 ntBASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chchd1Q9CQA6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chchd1Q9CQA6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chchd1Q9CQA6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chchd1Q9CQA6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chchd1Q9CQA6 Sybu-209ENSMUST00000228639 4113 ntBASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chchd1Q9CQA6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms