Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col25a1Q99MQ5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Gm7230-201ENSMUST00000173026 815 ntBASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col25a1Q99MQ5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Gm15173-201ENSMUST00000122049 433 ntBASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col25a1Q99MQ5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Gm8396-201ENSMUST00000057361 823 ntBASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.23■□□□□ 0.35
Col25a1Q99MQ5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Rprl3-201ENSMUST00000157400 290 ntBASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Gm23547-201ENSMUST00000158210 271 ntBASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Fst-202ENSMUST00000223640 2612 ntBASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col25a1Q99MQ5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms