Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Gm12260-201ENSMUST00000122447 411 ntBASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx6-1Q99MA9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx6-1Q99MA9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx6-1Q99MA9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Psmb5-202ENSMUST00000227257 622 ntBASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx6-1Q99MA9 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx6-1Q99MA9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx6-1Q99MA9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms