Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Scrt1Q99M85 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.6□□□□□ -0.07
Scrt1Q99M85 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Scrt1Q99M85 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Tgds-204ENSMUST00000228543 1594 ntBASIC14.6□□□□□ -0.07
Scrt1Q99M85 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scrt1Q99M85 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.59□□□□□ -0.07
Scrt1Q99M85 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Scrt1Q99M85 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scrt1Q99M85 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scrt1Q99M85 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scrt1Q99M85 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scrt1Q99M85 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Scrt1Q99M85 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scrt1Q99M85 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scrt1Q99M85 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scrt1Q99M85 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.58□□□□□ -0.08
Scrt1Q99M85 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.58□□□□□ -0.08
Scrt1Q99M85 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scrt1Q99M85 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Dancr-204ENSMUST00000132389 2347 ntBASIC14.57□□□□□ -0.08
Scrt1Q99M85 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Gm12895-201ENSMUST00000122214 226 ntBASIC14.57□□□□□ -0.08
Scrt1Q99M85 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.57□□□□□ -0.08
Scrt1Q99M85 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.57□□□□□ -0.08
Scrt1Q99M85 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.57□□□□□ -0.08
Scrt1Q99M85 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scrt1Q99M85 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Scrt1Q99M85 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.56□□□□□ -0.08
Scrt1Q99M85 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Gm18733-201ENSMUST00000173950 856 ntBASIC14.56□□□□□ -0.08
Scrt1Q99M85 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scrt1Q99M85 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms