Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.62■□□□□ 0.25
Cstf1Q99LC2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Gm10060-201ENSMUST00000212002 111 ntBASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.62■□□□□ 0.25
Cstf1Q99LC2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cstf1Q99LC2 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Gm12350-201ENSMUST00000121208 462 ntBASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cstf1Q99LC2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cstf1Q99LC2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cstf1Q99LC2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cstf1Q99LC2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.58■□□□□ 0.25
Cstf1Q99LC2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cstf1Q99LC2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cstf1Q99LC2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cstf1Q99LC2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.58■□□□□ 0.25
Cstf1Q99LC2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cstf1Q99LC2 Gm11779-201ENSMUST00000118541 368 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm43575-201ENSMUST00000196420 516 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44454-201ENSMUST00000198541 138 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms