Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chmp1aQ921W0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Mir6349-201ENSMUST00000184059 97 ntBASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chmp1aQ921W0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp1aQ921W0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Gm6576-201ENSMUST00000169678 883 ntBASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Gm5874-201ENSMUST00000096101 508 ntBASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp1aQ921W0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Gm26524-201ENSMUST00000192339 390 ntBASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms