Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Gm21362-201ENSMUST00000194272 928 ntBASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Gm14859-201ENSMUST00000117752 357 ntBASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Gm11950-201ENSMUST00000121615 838 ntBASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha11Q91Y19 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha11Q91Y19 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Gm7284-201ENSMUST00000131667 944 ntBASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdha11Q91Y19 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha11Q91Y19 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdha11Q91Y19 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha11Q91Y19 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.52■□□□□ 0.39
Pcdha11Q91Y19 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Gm44450-201ENSMUST00000199528 114 ntBASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha11Q91Y19 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms