Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb3Q91XZ7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Gm5643-201ENSMUST00000117081 966 ntBASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Gm25007-201ENSMUST00000083808 133 ntBASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb3Q91XZ7 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Gm10252-201ENSMUST00000209541 832 ntBASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb3Q91XZ7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb3Q91XZ7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb3Q91XZ7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms