Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga4Q91XY4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhga4Q91XY4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga4Q91XY4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Gm18032-201ENSMUST00000222541 538 ntBASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga4Q91XY4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhga4Q91XY4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Pcdhga4Q91XY4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Mir1668-201ENSMUST00000184114 107 ntBASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms