Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga9Q91XX9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhga9Q91XX9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga9Q91XX9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhga9Q91XX9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms