Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhgb2Q91XX7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgb2Q91XX7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhgb2Q91XX7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgb2Q91XX7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhgb2Q91XX7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgb2Q91XX7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhgb2Q91XX7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Gm17661-201ENSMUST00000170317 270 ntBASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Gm37025-201ENSMUST00000195159 829 ntBASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhgb2Q91XX7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Gm37292-201ENSMUST00000192062 758 ntBASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhgb2Q91XX7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhgb2Q91XX7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb2Q91XX7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms