Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb4Q91XX6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb4Q91XX6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgb4Q91XX6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgb4Q91XX6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgb4Q91XX6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Pcdhgb4Q91XX6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgb4Q91XX6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Pcdhgb4Q91XX6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgb4Q91XX6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb4Q91XX6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhgb4Q91XX6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Gm27463-201ENSMUST00000183569 57 ntBASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Gm37055-201ENSMUST00000191866 133 ntBASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb4Q91XX6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms